Upgrade to NSX-T 3.1.4 and 3.2.x for a permanent solution.
Workaround:
Bring down/up the uplink(vmnic) which is mapped to VTEP(vmk) under the overlay portset(hostswitch).
First you find out what physical interfaces are used by the NSX switch.
Then, VTEP(vmkX) to vmnic mapping can be done using esxtop and then press n at the ESXi CLI level:
Finally, bring down/up the aforementioned interfaces with the commands below:
esxcli network nic up -n vmnicX
esxcli network nic down -n vmnicX