Upgrade to NSX-T 3.1.4 and 3.2.x for a permanent solution.
Workaround:
Bring down/up the uplink(vmnic) which is mapped to VTEP(vmk) under the overlay portset(hostswitch).
First you find out what physical interfaces are used by the NSX switch.
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Then, VTEP(vmkX) to vmnic mapping can be done using esxtop and then press n at the ESXi CLI level:
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Finally, bring down/up the aforementioned interfaces with the commands below:
esxcli network nic up -n vmnicX
esxcli network nic down -n vmnicX