When an ESXi server is prepared in NSX managed cluster, the HBA (CNA) adapters on the host may become offline and all vSAN storage are gone from the host.
The N-VDS's LLDP profile is set to "Listen" on NSX-T 3.x or "Discovery Protocol" on the DVS in vCenter is set to use LLDP.
On the top of rack switch's interface, there may have a similar output as:
From the ESXi host log
/var/log/tdlog/vobd.all
There may have similar entries as:
2024-07-12T06:10:35.417Z: [netCorrelator] 82260298us: [vob.net.dvport.uplink.transition.down] Uplink: vmnic2 is down. Affected dvPort: <UUID>/<port ID> 1 uplinks up. Failed criteria: 128
VMware NSX-T 3.x
VMware NSX 4.x
This is caused by top-pf-rack switch incorrectly counting the number of LLDP neighbor when NSX onboards the DVS on the host.
For NSX-T 3.x:
For NSX 4.x: