When VAAI commands are issued via VAAI Filter, there are actually 2 commands sent. These are top-layer commands which are issued and are never sent to the actual device (they stay within the ESX kernel). These commands are intercepted by the VAAI filter and the VAAI plugin, and are replaced by the vendor-specific commands, which are issued to the device.
This is why esxtop shows device statistics for the top-level commands only, and as a result the values for DAVG and KAVG seem unusual when compared to results obtained when VAAI is not enabled .
In this instance (and only for this instance), the DAVG and KAVG observed in esxtop should not be interpreted as a performance issue, absent of any other symptoms. The DAVG and KAVG values observed for non-VAAI workloads are still valid.