Variance metric issue is intermittent. The steps that we do is the follow:
1. Set up metric grouping
2. Set up differential analysis
In many cases it doesn't appears in the respective folder.
APM SaaS
Problem was because of the EPAgent stale metric was removed after a default period of 6 minutes.
introscope.epagent.config.staleMetricsRemoval.intervalInSec=360
After disabling the above property, it started working fine.