When attempting to configure Analytics to use SSL, the agent will only look in the backend folder, regardless of configuration.
For example:
server.ssl.key-store=C:\keystore\server.keystore.jks
will generate the following error at startup:
Caused by: java.io.FileNotFoundException: C:\Automic\Automation.Platform\Analytics\backend\server.keystore.jks (The system cannot find the file specified)